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The answer seems obvious: No Church could publicly back any government or foreign group that abuses human rights. Historically, the Church's stance may have been different behind the scenes, as most well-known recently in South America. However, Pope John Paul II issued a number of apologies for past wrongs, on behalf of the Church, and these should define the Catholic Church's present stance on these issues. He apologised for:
Pope Francis seems unlikely to depart from the spirit of John Paul's apologies.