Upvote:0
Short answer, No.
I did almost the exact same thing in the past. I had a French long stay visa and entered the Schengen Region thru Amsterdam and then traveled to France via Train.
As long as you have a valid Schengen Visa, you should not have a problem at Germany thru immigration. Also, you have a valid connecting flight to Paris in the next few hours so the Visa Official would not be concerned.
Check answers here for more information - Should my first trip be to the country which issued me Schengen Visa?